FastQCFastQC Report
Sun 2 Feb 2025
SRR29479668.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR29479668.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences796642
Total Bases12.4 Gbp
Sequences flagged as poor quality0
Sequence length40-57113
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCTCTCAACAACAACAACGGAGGAGGAGGAAAAGAGAGAGATCTCTCT20980.2633554344360453No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)